Authors: Pan R, Qi L, Xu Z, Zhang D, Nie Q, Zhang X, Luo W
(Contact: luowen729@scau.edu.cn ) Affiliation: State Key Laboratory of Livestock and Poultry Breeding, & Lingnan Guangdong Laboratory of Agriculture, South China Agricultural University, Guangzhou 510642, China Title: Weighted single-step GWAS identified candidate genes associated with carcass traits in a Chinese yellow-feathered chicken population Journal: Poultry Science, 103(2): 103341 (2024)
DOI :
10.1016/j.psj.2023.103341 Links:
PubMed | Abstract
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( Related study: none )
Click on each trait to browse further along the related trait ontology tree
Click on each chromosome number to find the detailed QTL information on that chromosome
Number of QTL/association reported by traits:
QTL for Carcass weight
Chr.1 : QTL:287919 , QTL:287928 , QTL:287959 , QTL:287961 , QTL:287967 , QTL:287973 . Chr.3 : QTL:287921 , QTL:287927 , QTL:287963 . Chr.6 : QTL:287972 . Chr.10 : QTL:287925 , QTL:287964 , QTL:287970 . Chr.13 : QTL:287924 , QTL:287957 , QTL:287966 . Chr.15 : QTL:287926 , QTL:287958 , QTL:287969 . Chr.22 : QTL:287920 , QTL:287962 , QTL:287971 . Chr.24 : QTL:287922 , QTL:287923 , QTL:287960 , QTL:287965 , QTL:287968 . Chr.26 : QTL:287974 .
QTL for Breast muscle weight
Chr.1 : QTL:287931 , QTL:287933 , QTL:287937 . Chr.3 : QTL:287938 . Chr.5 : QTL:287944 . Chr.8 : QTL:287943 . Chr.10 : QTL:287936 . Chr.11 : QTL:287941 . Chr.12 : QTL:287935 . Chr.13 : QTL:287930 . Chr.15 : QTL:287929 , QTL:287939 . Chr.17 : QTL:287942 . Chr.22 : QTL:287934 . Chr.25 : QTL:287932 , QTL:287940 .
QTL for Drumstick weight
Chr.1 : QTL:287945 , QTL:287947 . Chr.2 : QTL:287946 . Chr.3 : QTL:287948 , QTL:287952 . Chr.4 : QTL:287955 . Chr.8 : QTL:287951 . Chr.13 : QTL:287949 . Chr.14 : QTL:287954 . Chr.20 : QTL:287953 . Chr.21 : QTL:287956 . Chr.28 : QTL:287950 .
QTL for Abdominal fat weight
Chr.1 : QTL:287976 , QTL:287981 , QTL:287982 . Chr.2 : QTL:287983 . Chr.3 : QTL:287988 . Chr.4 : QTL:287977 , QTL:287986 . Chr.5 : QTL:287978 . Chr.6 : QTL:287984 . Chr.15 : QTL:287979 . Chr.21 : QTL:287980 . Chr.26 : QTL:287987 . Chr.27 : QTL:287985 . Chr.28 : QTL:287975 .
QTL for Abdominal fat percentage
Chr.1 : QTL:287989 , QTL:287994 , QTL:287995 . Chr.2 : QTL:287997 . Chr.3 : QTL:287996 . Chr.4 : QTL:287990 , QTL:287991 . Chr.5 : QTL:287992 . Chr.7 : QTL:287999 . Chr.20 : QTL:287998 . Chr.28 : QTL:287993 .
QTL for Gizzard weight
Chr.1 : QTL:288013 . Chr.2 : QTL:288001 , QTL:288002 . Chr.7 : QTL:288011 . Chr.9 : QTL:288010 . Chr.10 : QTL:288007 . Chr.12 : QTL:288015 . Chr.14 : QTL:288005 . Chr.20 : QTL:288003 . Chr.21 : QTL:288004 . Chr.23 : QTL:288009 . Chr.24 : QTL:288008 . Chr.25 : QTL:288006 , QTL:288014 . Chr.27 : QTL:288000 , QTL:288012 .
QTL for Intestine length
Chr.1 : QTL:288022 . Chr.2 : QTL:288021 . Chr.3 : QTL:288017 . Chr.6 : QTL:288018 . Chr.7 : QTL:288020 , QTL:288023 , QTL:288027 . Chr.14 : QTL:288019 , QTL:288024 . Chr.20 : QTL:288016 . Chr.22 : QTL:288025 . Chr.26 : QTL:288026 , QTL:288028 .
QTL/association Reported by chromosomes:
Chr.1 (19) ,
Chr.2 (6) ,
Chr.3 (9) ,
Chr.4 (5) ,
Chr.5 (3) ,
Chr.6 (3) ,
Chr.7 (5) ,
Chr.8 (2) ,
Chr.9 (1) ,
Chr.10 (5) ,
Chr.11 (1) ,
Chr.12 (2) ,
Chr.13 (5) ,
Chr.14 (4) ,
Chr.15 (6) ,
Chr.17 (1) ,
Chr.20 (4) ,
Chr.21 (3) ,
Chr.22 (5) ,
Chr.23 (1) ,
Chr.24 (6) ,
Chr.25 (4) ,
Chr.26 (4) ,
Chr.27 (3) ,
Chr.28 (3) .
Number of gene-based eQTL/associations:
Cite this Dataset :
Animal QTLdb: Dataset from Pan R, Qi L, Xu Z, Zhang D, Nie Q, Zhang X, Luo W (2024). Weighted single-step GWAS identified candidate genes associated with carcass traits in a Chinese yellow-feathered chicken population. Poultry science, 103(2): 103341;
Curated into QTLdb on 2024-02-28. Universal link to this data set:
https://www.animalgenome.org/QTLdb/supp/?t=IpUv0E5RyF
OR
Pan R, Qi L, Xu Z, Zhang D, Nie Q, Zhang X, Luo W (2024). Weighted single-step GWAS identified candidate genes associated with carcass traits in a Chinese yellow-feathered chicken population. Poultry science, 103(2): 103341; DOI: https://dx.doi.org/10.1016/j.psj.2023.103341
