| Framework markers | Marker ID | Primer 1 | Primer 2 | Retention Frequency | Gene Names |
|---|---|---|---|---|---|
| F3 | AGLA254 | GCTGCTTGGCACAGGCAAA | GGATTAATTTCTGGACTCTG | 0.17 | |
| F2 | AGLA293 | GAAACTCAACCCAAGACAACTCAAG | ATGACTTTATTCTCCACCTAGCAGA | 0.277 | |
| BL23 | TCAATCCCTGGGTCAGGAAG | CTTATTTCAAAATTCGGTTGGG | 0.237 | ||
| BL4 | AAATTTTTCATCCTTCTTTCTGAC | TCACCCTGACTGTGAATGC | 0.151 | ||
| BM1819 | AGCACTGTGGGAATTATGGG | TGGAATGAGCCAGCTCAAG | 0.202 | ||
| F4 | BM2830 | AATGGGCGTATAAACACAGATG | TGAGTCCTGTCACCATCAGC | 0.228 | |
| BM315 | TGGTTTAGCAGAGAGCACATG | GCTCCTAGCCCTGCACAC | 0.194 | ||
| F2 | BM321 | AAGGGTCAGACAAAACTTAGCA | ATCCTTGCCCTAATTCTCATTC | 0.326 | |
| BM6026 | GCAACTAAGACCCAACCAAC | CATCGTGAATTCCAGGGTTC | 0.29 | ||
| F4 | BM733 | ATGCTCCTTGTGCTCTCACC | GCCATAGGAGAAAAACTTGGG | 0.204 | |
| BM8126 | TCTTCCTCCGCAGACTGG | GAACCTGTGGATGAGCGG | 0.258 | ||
| BM8230 | GTAATTCTGGACACGACACACA | TTAAGGATATGCAGAGGGTGTT | 0.17 | ||
| F2 | BMC1009 | GCACCAGCAGAGAGGACATT | ACCGGCTATTGTCCATCTTG | 0.269 | |
| F1 | BMS1095 | AGGGATTGGTTTATGCTCTCTC | GTTGCAGAGTCGGACATGAC | 0.272 | |
| BMS1216 | GAGTAGAACACAACTGAGGACACA | CAATGCTGTGGGTACTGAGG | 0.223 | ||
| F3 | BMS1248 | GTAATGTAGCCTTTTGTGCCG | TCACCAACATGAGATAGTGTGC | 0.204 | |
| F2 | BMS1315 | AAGCCATTGATTGTAGATTGGG | GAGTTTCCTTTTTCCCCCAC | 0.312 | |
| BMS1617 | GCCTGCATGTGTCTGTGG | TCTGTGTCGGAATACCCTCC | 0.151 | ||
| F4 | BMS1658 | ATTGATGCTTTATGATCCTCATG | CCCACTAAGAGAGGAGGAGG | 0.187 | |
| BMS1898 | GACATCACTTTGGGGCATG | TCTCCCCACCTCTTCCATC | 0.277 | ||
| F3 | BMS490 | TCACCAGGAAAGTCTCTATTTGG | ATATGCATCAACTCACACTGCC | 0.165 | |
| F5 | BMS597 | AGAAGAAGAGCAAGAGCAAAGG | AAGAAGACCTCTCTGACCCTCC | 0.258 | |
| F1 | BMS610 | TTTCACTGTCATCTCCCTAGCA | ATGTATTCATGCACACCACACA | 0.286 | |
| F1 | BMS695 | CAATTAAAAAACCCTGACAGCA | TGTCCAAGAAGATCAGGTCTCA | 0.312 | |
| BMS722 | TTGTGCAATCAAGTGGTAACTG | CTCACTAAGATGCCTGGTGATC | 0.287 | ||
| BP1 | AAAATCCCTTCATAACAGTGCC | CATCGTGAATTCCAGGGTTC | 0.217 | ||
| BR2936 | GAGCCTTGTGGGCTACAGTC | GAAGATTGCAAATGGAAAGACC | 0.213 | ||
| F4 | CD9* | GAGTCAAGCTTTGTGCCCTG | GTACAATATCTTTTGTCTAGAG | 0.277 | CD9 antigen |
| CSSM22 | TCTCTCTAATGGAGTTGGTTTTTG | ATATCCCACTGAGGATAAGAATTC | 0.202 | ||
| CSSM34 | CCATAACTCTGGGACTTTTCCTCA | ATGTTCAGCCATCTCTCCTTGTCC | 0.308 | ||
| ETH10 | GTTCAGGACTGGCCCTGCTAACA | CCTCCAGCCCACTTTCTCTTCTC | 0.194 | ||
| F5 | ETH152 | TACTCGTAGGGCAGGCTGCCTG | GAGACCTCAGGGTTGGTGATCAG | 0.287 | |
| ETH2 | CCCACAGGTGCTGGCATGGCC | CCATGGGATTTGCCCTGCTAGCT | 0.198 | ||
| F5 | IDVGA9 | GTCAGGTCTAAACCCAGAGCC | TCAAAAGGGCAGAGTTCCAC | 0.309 | |
| F3 | ILSTS066 | TGGAGGTTTGGGATTGGAGG | GAGTATGGAGTGACTGAGGG | 0.215 | |
| KR71B | GCTCCTCGGTTCTCACCTCT | CTGGATGCCTGAAGGACAAG | 0.258 | ||
| MAF23 | GTGGAGGAATCTTGACTTGTGATAG | GGCTATAGTCCATGGAGTCGCAG | 0.301 | ||
| MAF48 | TCACTAAACCAGGGGCGG | GAGGCAGGCAAAATCAGAAC | 0.33 | ||
| MYF5 | ACAGCGTCTACTGTCCTGATG | CGTGGCATATACTAAGGACAC | 0.245 | ||
| OVO182 | TGTAGTTTCCAAGCTGAACGGCA | TATCTCGGCAATCGGCTCTAACG | 0.298 | ||
| F2 | OVO190 | ATCTTTACTTTTGAAACAGG | GCAGCATGTCATACTCAACT | 0.223 | |
| F2 | OVO251 | TTGATTCTCTGCTAGGCCTG | GTCATTCTTGGCACTGTTTC | 0.255 | |
| OVO268 | CATCACTCCAGAGTGGATTG | CCTTCGACTCTGATCGCCTT | 0.255 | rhodopsin | |
| RHOD* | ACGTGCCTTTCTCCAACAAGAC | TCTTGTGCTGGACTGTGACGTA | 0.234 | ||
| RM029 | ATATGTCTCTGCATATCTGTTTAT | CTAATCCCATAGTGAGCAGACC | 0.223 | ||
| RM103 | TCTGTGCACTTTACATTTAACAGA | GTGGTCTATTGAACTTTTGTTCAGA | 0.255 |