Cattle QTL Database

Release 55
(Dec 23, 2024)

Curator: Cari Park
Curated: 2013-03-22
Updated: 2024-04-23

Publication # 22114848 Details

Authors:	Rincon G, Islas-Trejo A, Castillo AR, Bauman DE, German BJ, Medrano JF (Contact: jfmedrano@ucdavis.edu)
Affiliation:	Department of Animal Science, University of California, Davis, CA 95616, USA.
Title:	Polymorphisms in genes in the SREBP1 signalling pathway and SCD are associated with milk fatty acid composition in Holstein cattle.
Journal:	Journal Of Dairy Research, 79 (1): 66-75 (2012)	DOI: 10.1017/S002202991100080X
Links:	PubMed \| Abstract \|	( Related study: none )
Click on each trait to browse further along the related trait ontology tree Click on each chromosome number to find the detailed QTL information on that chromosome Number of QTL/association reported by traits: QTL for Milk saturated to unsaturated fatty acid ratio reported for chromosome(s): Chr.X: Asso:20026, Asso:20027. Chr.2: Asso:20003, Asso:20004, Asso:20005. Chr.4: Asso:20032, Asso:20033. Chr.6: Asso:20017, Asso:20018. Chr.14: Asso:20044. QTL for Milk saturated fatty acid content reported for chromosome(s): Chr.X: Asso:20028, Asso:20029. Chr.2: Asso:20006, Asso:20007, Asso:20008, Asso:20009, Asso:20010. Chr.4: Asso:20034, Asso:20035, Asso:20036, Asso:20037, Asso:20038. Chr.6: Asso:20019, Asso:20020, Asso:20021, Asso:20022. Chr.19: Asso:20048. Chr.22: Asso:20046. QTL for Milk monounsaturated fatty acid content reported for chromosome(s): Chr.X: Asso:20030, Asso:20031. Chr.2: Asso:20011, Asso:20012, Asso:20013. Chr.4: Asso:20039, Asso:20040, Asso:20041. Chr.6: Asso:20023, Asso:20024, Asso:20042, Asso:20043. Chr.19: Asso:20049. Chr.22: Asso:20047. QTL for Milk polyunsaturated fatty acid content reported for chromosome(s): Chr.2: Asso:20014, Asso:20015, Asso:20016. Chr.6: Asso:20025. Chr.14: Asso:20045. QTL for Milk fatty acid unsaturated index reported for chromosome(s): Chr.X: Asso:20060, Asso:20061. Chr.2: Asso:20056, Asso:20057, Asso:20058, Asso:20059. Chr.4: Asso:20062, Asso:20063, Asso:20064. Chr.6: Asso:20050, Asso:20051, Asso:20052, Asso:20053, Asso:20054, Asso:20055. Chr.19: Asso:20065. QTL/association Reported by chromosomes: Chr.X (8), Chr.2 (18), Chr.4 (13), Chr.6 (17), Chr.14 (2), Chr.19 (3), Chr.22 (2). Number of gene-based eQTL/associations: None

Cite this Dataset:

Animal QTLdb: Dataset from Rincon G, Islas-Trejo A, Castillo AR, Bauman DE, German BJ, Medrano JF (2012). Polymorphisms in genes in the SREBP1 signalling pathway and SCD are associated with milk fatty acid composition in Holstein cattle.. Journal of Dairy Research, 79 (1): 66-75; Curated into QTLdb on 2013-03-28. Universal link to this data set: https://www.animalgenome.org/QTLdb/supp/?t=LxFc1C5PwE

Rincon G, Islas-Trejo A, Castillo AR, Bauman DE, German BJ, Medrano JF (2012). Polymorphisms in genes in the SREBP1 signalling pathway and SCD are associated with milk fatty acid composition in Holstein cattle.. Journal of Dairy Research, 79 (1): 66-75; DOI: https://dx.doi.org/10.1017/S002202991100080X

Publication # 22114848 Details

Number of QTL/association reported by traits:

QTL/association Reported by chromosomes:

Number of gene-based eQTL/associations: