Release 56
(Apr 24, 2025)

QTL 125200 Description:

 Trait Information
Trait name: Somatic cell score Vertebrate Trait Ontology: Milk somatic cell quantity
Reported name: (n/a) Product Trait Ontology: Milk somatic cell count
Symbol: SCS Clinical Measurement Ontology: Milk somatic cell score
 QTL Map Information
Chromosome:18
QTL Peak Location:2.41 (cM)
QTL Span:2.41-2.41 (cM)
1.8-1.8 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs29014958
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:Mendelian
Test base:Genome-wise
Threshold significance level:Significant
F_Stat14.54
P_values<0.05
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Canadian Holstein bulls.
     Breeds associated:
    Design:Animals were genotyped for 1,536 SNPs and analyzed for milk production traits.
    Analysis:A single-locus linkage disequilibrium regression model was used.
    Software:ASReml
    Notes: 
    Links:Edit

     Reference
    Authors:Kolbehdari D, Wang Z, Grant J R, Murdoch B, Prasad A, Xiu Z, Marques E, Stothard P, Moore S S
    Affiliation:Department of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, Alberta, Canada
    Title:A whole genome scan to map QTL for milk production traits and somatic cell score in Canadian Holstein bulls
    Journal:Journal of animal breeding and genetics, 2009, 126(3): 216-27
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  

     Additional Information
    Comments:EBV
    User inputs on reference #19646150
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  • Cite this Data:

    Animal QTLdb: QTL125200 was published in 2009, and was curated into QTLdb on 2017-02-02. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:125200

     

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