| QTL Map Information |
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| Chromosome: | 19 |
| QTL Peak Location: | 86.71 (cM) |
| QTL Span: | 86.71-86.71 (cM)
48.1-48.1 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs41916250 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
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| Animals: | The data set consisted of 399 Chinese Holstein cattle. |
| Breeds associated:
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| Design: | Animals were genotyped using the GGP Bovine 50K XT SNP chip and analyzed for milk production. The final marker set included 361 animals with 41,092 SNPs genotypes. |
| Analysis: | fixed-effect linear model (FLM),mixed-effect linear model (MLM) |
| Software: | PLINK (v1.07), GCTA (v1.2.4) |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Shi KR, Niu FG, Zhang Q, Ning C, Yue SJ, Hu CZ, Xu ZJ, Wang SX, Li RR, Hou QL, Wang ZH |
| Affiliation: | College of Animal Science and Technology, Shandong Agricultural University, Shandong Key Laboratory of Animal Bioengineering and Disease Prevention, Taian, Shandong, 271018, P. R. China |
| Title: | Identification of whole-genome significant single nucleotide polymorphisms in candidate genes associated with serum biochemical traits in Chinese Holstein cattle |
| Journal: | Frontiers in Genetics, 2020, 11:163 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | Significant SNPs identified by using fixed-effect model(FLM) |
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