Release 56
(Apr 24, 2025)

QTL 20525 Description:

 Trait Information
Trait name: C22:1 fatty acid content Vertebrate Trait Ontology: n/a
Reported name: C22:1 fatty acid content Product Trait Ontology: Meat fatty acid C22:1 content
Symbol: FA-C22:1 Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:10
QTL Peak Location:100.36 (cM)
QTL Span:99.83-100.89 (cM)
87.0-88.0 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":rs42249704
Peak:rs81172993
Lower, "Significant":rs42342704
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:QTL
Model tested:Mendelian
Test base:n/a
Threshold significance level:Significant
PostProbInc1
VARIANCE36.1
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Cis/Trans acting type:
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

User inputs on QTL #20525
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  •  QTL Experiment in Brief
    Animals:Animals were Angus-sired calves. Animal breed (IDs) involved:
     Breeds associated:
    Design:Animals were genotyped using the Illumina BovineSNP50 BeadChip and analyzed for meat fatty acid composition.
    Analysis:The BayesB method was used.
    Software:GenSel
    Notes:**In this study, medium- and long-chain fatty acids are defined differently than elsewhere in QTLdb/CHEBI. Please use caution when comparing data.
    Links:Edit

     Reference
    Authors:Saatchi M, Garrick DJ, Tait RG Jr, Mayes MS, Drewnoski M, Schoonmaker J, Diaz C, Beitz DC, Reecy JM
    Affiliation:Department of Animal Science, Iowa State University, 2255 Kildee Hall, Ames, IA 50011, USA
    Title:Genome-wide association and prediction of direct genomic breeding values for composition of fatty acids in Angus beef cattle
    Journal:BMC Genomics, 2013, 14:730
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  

     Additional Information
    Comments:Beef basis
    User inputs on reference #24156620
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  • Cite this Data:

    Animal QTLdb: QTL20525 was published in 2013, and was curated into QTLdb on 2013-04-23. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:20525

     

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