Release 56
(Apr 24, 2025)

QTL 284870 Description:

 Trait Information
Trait name: Sperm count Vertebrate Trait Ontology: Sperm quantity
Trait details: live sperm count Product Trait Ontology: n/a
Symbol: SPERMCT Clinical Measurement Ontology: Sperm count
 QTL Map Information
Chromosome:24
QTL Peak Location:n/a
QTL Span:n/a
47.7-47.7 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:CNV
Analysis type:QTL
Model tested:n/a
Test base:n/a
Threshold significance level:Significant
P_values0.047
Dominance effect:n/a
Additive effect:n/a
Associated Gene:SMAD2 (SMAD family member 2)
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Shaanbei White Cashmere goats.
     Breeds associated:
    Design:Animals were analyzed for association of two CNVs in the SMAD2 gene with litter size and semen quality traits.
    Analysis:One-way ANOVA was used.
    Software:PennCNV, SHEsis, SPSS v25.0
    Notes: 
    Links:Edit

     Reference
    Authors:Wijayanti D, Luo Y, Bai Y, Pan C, Qu L, Guo Z, Lan X
    Affiliation:Key Laboratory of Animal Genetics, Breeding and Reproduction of Shaanxi Province, College of Animal Science and Technology, Northwest A&F University, Yangling, Shaanxi, 712100, China
    Title:New insight into copy number variations of goat SMAD2 gene and their associations with litter size and semen quality
    Journal:Theriogenology, 2023, 206: 114-122
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #37229957
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  • Cite this Data:

    Animal QTLdb: QTL284870 was published in 2023, and was curated into QTLdb on 2023-09-20. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:284870

     

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