| QTL Map Information |
|---|
| Chromosome: | 21 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
3.5-3.5 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs268288690 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | - |
| Test base: | Experiment-wise |
| Threshold significance level: | Significant |
 |
FDR | 2.69E-8 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Markhoz goats. |
| Breeds associated:
|
| Design: | Goats were genotyped using the Illumina Caprine 50K BeadChip and GWAS was performed for litter size at birth and weaning. A total of 49,764 SNPs were used for analysis. |
| Analysis: | A Bayesian information and linkage disequilibrium iteratively nested keyway (BLINK) model was used. |
| Software: | ASReml 2.0, Golden Helix SVS v8.3.4, GAPIT v3.0 in R, SAS v8.2, GCTA, KDAK v5.1 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Mahmoudi P, Rashidi A, Nazari-Ghadikolaei A, Rostamzadeh J, Razmkabir M, Huson HJ |
| Affiliation: | Department of Animal Science, Faculty of Agriculture, University of Kurdistan, Sanandaj, Iran |
| Title: | Genome-wide association study reveals novel candidate genes for litter size in Markhoz goats |
| Journal: | Frontiers in Veterinary Science, 2022, 9: 1045589 |
| Links: |
PubMed | Abstract | List all data
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