| QTL Map Information |
|---|
| Chromosome: | 3 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
11.4-11.4 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs396607511 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | - |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
VARIANCE | 1.147% | | P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Yili horses. |
| Breeds associated:
|
| Design: | Animals were subjected to genome sequencing, and GWAS were performed for racing performance traits. A total of 10,741,200 SNPs were used for analysis. |
| Analysis: | Blink and FarmCPU models were used. |
| Software: | SAS 8.1, DMU software, PLINK, GAPIT v3, GATK v4.0.4.0, GCTA v1.92.4 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Wang C, Zeng Y, Wang J, Wang T, Li X, Shen Z, Meng J, Yao X |
| Affiliation: | College of Animal Science, Xinjiang Agricultural University, Urumqi, 830052, China |
| Title: | A genome-wide association study of the racing performance traits in Yili horses based on Blink and FarmCPU models |
| Journal: | Scientific reports, 2024, 14(1): 27648 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | FarmCPU model |
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