| QTL Map Information |
|---|
| Chromosome: | 5 |
| QTL Peak Location: | 0.00 (cM) |
| QTL Span: | n/a
37.5-37.5 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs15703226 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | n/a |
| Threshold significance level: | Significant |
 |
P_values | 0.0269 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
|
| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Birds were laying hens chosen at random from nine genetic lines (4 Rhode Island Red and 5 White Leghorn type). |
| Breeds associated:
|
| Design: | Birds were genotyped for 1022 SNPs and analyzed for immune traits. |
| Analysis: | First, an association study was performed without accounting for relationships between animals. Selected SNPs from this analysis were analyzed in more detail using a mixed model and taking into account additive genetic relationships among animals. |
| Software: | R software, ASREML |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Biscarini F, Bovenhuis H, van Arendonk JA, Parmentier HK, Jungerius AP, van der Poel JJ |
| Affiliation: | Animal Breeding and Genomics Centre, Wageningen University, The Netherlands |
| Title: | Across-line SNP association study of innate and adaptive immune response in laying hens |
| Journal: | Animal Genetics, 2010, 41(1):26-38 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | 40 weeks |
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