| QTL Map Information |
|---|
| Chromosome: | 13 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
9.7-9.7 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs315953420 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Hens were from an 11th generation population of Rhode Island Red chickens. |
| Breeds associated:
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| Design: | Birds were genotyped using the Affymetrix 600K chicken SNP chip and analyzed for egg quality traits at 72 and 80 weeks of age. A total of 294,705 SNPs were used for analysis. |
| Analysis: | Univariate and bivariate association analyses were performed using mixed models. |
| Software: | R software, PLINK, GEMMA, GenABEL |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Liu Z, Sun C, Yan Y, Li G, Shi F, Wu G, Liu A, Yang N |
| Affiliation: | National Engineering Laboratory for Animal Breeding and MOA Key Laboratory of Animal Genetics and Breeding, College of Animal Science and Technology, China Agricultural University, Beijing, 100193, China |
| Title: | Genetic variations for egg quality of chickens at late laying period revealed by genome-wide association study |
| Journal: | Scientific reports, 2018, 8(1): 10832 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | Significant in both univariate and bivariate GWAS |
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