| QTL Map Information |
|---|
| Chromosome: | 6 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
31.2-31.8 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | rs14593228 |
| Peak: | |
| Lower, "Significant": | rs312809174 |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | QTL |
| Model tested: | n/a |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
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| QTL Experiment in Brief |
|---|
| Animals: | Birds were from two boiler lines divergently selected for abdominal fat content. |
| Breeds associated:
n/a
|
| Design: | Chickens were genotyped using the Illumina chicken 60K SNP chip and analyzed for growth and carcass traits. A total of 48,034 SNPs were used for analysis. |
| Analysis: | Haplotype-based GWAS was conducted using a linear regression method. |
| Software: | LinkPHASE3, DAGPHASE, Beagle, PLINK v1.07 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Zhang H, Shen LY, Xu ZC, Kramer LM, Yu JQ, Zhang XY, Na W, Yang LL, Cao ZP, Luan P, Reecy JM, Li H |
| Affiliation: | Key Laboratory of Chicken Genetics and Breeding, Key Laboratory of Animal Genetics, Breeding and Reproduction, Education Department of Heilongjiang Province, College of Animal Science and Technology, Northeast Agricultural University, Harbin, PR China |
| Title: | Haplotype-based genome-wide association studies for carcass and growth traits in chicken |
| Journal: | Poultry science, 2020, 99(5): 2349-2361 |
| Links: |
PubMed | Abstract | List all data
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