| QTL Map Information |
|---|
| Chromosome: | Z |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
|
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | rs318133768 |
| Peak: | |
| Lower, "Significant": | rs314585413 |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | QTL |
| Model tested: | n/a |
| Test base: | n/a |
| Threshold significance level: | Significant |
 |
P_values | <0.01 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #263591
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Chickens either from a full-sib advanced intercross line used to map QTLRs affecting MD resistance produced by intercrossing two White Leghorn lines (F6), or from eight elite commercial egg production lines representing White Leghorn, White Plymouth Rock, and Rhode Island Red. |
| Breeds associated:
|
| Design: | Birds were genotyped using the Affymetrix 600K chicken SNP array, and markers on GGZ were analyzed for association with Marek's Disease susceptibility. |
| Analysis: | In the F6 population, QTLRs were mapped using the JMP SNP-trait association trend test. For the eight elite lines, males with high or low daughter MD mortality were selected and used to create DNA pools, and QTLs were identified within lines. |
| Software: | JMP Genomics |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Lipkin E, Smith J, Soller M, Burt DW, Fulton JE |
| Affiliation: | Department of Genetics, The Alexander Silberman Institute of Life Sciences, The Hebrew University of Jerusalem, Edmond J. Safra Campus, Givat Ram, Jerusalem 91904, Israel |
| Title: | Sex Differences in Response to Marek's Disease: Mapping Quantitative Trait Loci Regions (QTLRs) to the Z Chromosome |
| Journal: | Genes, 2022, 14(1):20 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | F6 population, family 2 |
User inputs on reference #36672761
Add your comments
Note similar findings
Note contradictions
|
