| QTL Map Information |
|---|
| Chromosome: | 4 |
| QTL Peak Location: | 0.00 (cM) |
| QTL Span: | 103.16-103.72 (cM)
83.2-83.7 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | rs422230966 |
| Peak: | rs424536912 |
| Lower, "Significant": | rs430525558 |
| Lower, "Suggestive": | n/a |
| Marker type: | SIG of SEL |
| Analysis type: | QTL |
| Model tested: | n/a |
| Test base: | n/a |
| Threshold significance level: | Significant |
 |
P_values | 0.0053 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were from divergent lines of Romney and Perendale sheep selectively bred for high or low fecal nematode egg count. |
| Breeds associated:
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| Design: | Animals were genotyped using the Illumina OvineSNP50 BeadChip and analyzed for selection signatures associated with resistance or susceptibility to gastrointestinal nematodes. |
| Analysis: | Two single-marker tests for differentiation, F(ST) and Peddrift, were used to distinguish signals of selection between selection lines from whole-genome data. |
| Software: | Haploview, fastPHASE |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | McRae KM, McEwan JC, Dodds KG, Gemmell NJ |
| Affiliation: | AgResearch, Invermay Agricultural Research Centre, Mosgiel, New Zealand |
| Title: | Signatures of selection in sheep bred for resistance or susceptibility to gastrointestinal nematodes |
| Journal: | BMC genomics, 2014, 15: 637 |
| Links: |
PubMed | Abstract | List all data
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