| QTL Map Information |
|---|
| Chromosome: | 2 |
| QTL Peak Location: | 171.11 (cM) |
| QTL Span: | 168.65-173.56 (cM)
133.2-137.1 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | rs406516645 |
| Peak: | |
| Lower, "Significant": | rs425608432 |
| Lower, "Suggestive": | n/a |
| Marker type: | SIG of SEL |
| Analysis type: | QTL |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 4.11E-6 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #126986
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Animals were fat-tailed (Hu, Tong, Large-Tailed Han, and Lop) and thin-tailed (Tibetan sheep from Qinhai, Sichuan, and Tibet) sheep. |
| Breeds associated:
n/a
|
| Design: | Animals were genotyped using the Illumina OvineSNP50 BeadChip and analyzed for signatures of selection related to tail fat deposition. |
| Analysis: | Selection signature analysis was conducted using hapFLK and F(ST) approaches. |
| Software: | PLINK, SNPSTATS R package, HAPFLK |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Yuan Z, Liu E, Liu Z, Kijas J W, Zhu C, Hu S, Ma X, Zhang L, Du L, Wang H, Wei C |
| Affiliation: | Institute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing, China |
| Title: | Selection signature analysis reveals genes associated with tail type in Chinese indigenous sheep |
| Journal: | Animal genetics, 2017, 48(1): 55-66 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | Identified by hapFLK |
User inputs on reference #27807880
Add your comments
Note similar findings
Note contradictions
|
