| QTL Map Information |
|---|
| Chromosome: | 25 |
| QTL Peak Location: | 60.70 (cM) |
| QTL Span: | 60.70-60.70 (cM)
40.2-40.2 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs399750484 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Chromosome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | GRID1 (glutamate ionotropic receptor delta type subunit 1) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Wadi ewes. |
| Breeds associated:
n/a
|
| Design: | Animals were gentoyped using the Ovine Infinium HD SNP BeadChip and analyzed for SNP association with supernumerary teats. A total of 509,454 SNPs were used for analysis. |
| Analysis: | Genome-wide association analysis was conducted based on a case-control model. |
| Software: | PLINK, Haploview, GenABEL in R, GENEPOP |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Peng WF, Xu SS, Ren X, Lv FH, Xie XL, Zhao YX, Zhang M, Shen ZQ, Ren YL, Gao L, Shen M, Kantanen J, Li MH |
| Affiliation: | CAS Key Laboratory of Animal Ecology and Conservation Biology, Institute of Zoology, Chinese Academy of Sciences (CAS), Beijing, 100101, China |
| Title: | A genome-wide association study reveals candidate genes for the supernumerary nipple phenotype in sheep (Ovis aries) |
| Journal: | Animal genetics, 2017, 48(5):570-579 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | supernumerary teats |
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