| QTL Map Information |
|---|
| Chromosome: | 16 |
| QTL Peak Location: | 41.71 (cM) |
| QTL Span: | 41.71-41.71 (cM)
35.3-35.3 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs423715727 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 4.60E-4 | | Dominance effect: | 0.26 |
| Additive effect: | -0.22 |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Greek Chios sheep. |
| Breeds associated:
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| Design: | Animals were genotyped using a custom-made, 960-SNP DNA array targeting regions with large effects on mastitis resistance. After quality control, 710 SNPs remained for analysis of association with mastitis traits. |
| Analysis: | Mixed models were used. |
| Software: | GenABEL in R, GEMMA, PLINK, Haploview, ASReml |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Banos G, Bramis G, Bush S J, Clark E L, McCulloch M E B, Smith J, Schulze G, Arsenos G, Hume D A, Psifidi A |
| Affiliation: | Royal Veterinary College, University of London, AL9 7TA, Hatfield, UK |
| Title: | The genomic architecture of mastitis resistance in dairy sheep |
| Journal: | BMC genomics, 2017, 18(1): 624 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | California Mastitis Test; weeks 18-23 |
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