Release 56
(Apr 24, 2025)

QTL 160622 Description:

 Trait Information
Trait name: Offspring number Vertebrate Trait Ontology: Offspring quantity
Trait details: litter size (born alive) Product Trait Ontology: n/a
Symbol: LLS Clinical Measurement Ontology: Number of offspring
 QTL Map Information
Chromosome:6
QTL Peak Location:60.45 (cM)
QTL Span:60.45-60.45 (cM)
45.4-45.4 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs400083304
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:Mendelian
Test base:Experiment-wise
Threshold significance level:Suggestive
P_values7.71E-2
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Lori-Bakhtiari sheep.
     Breeds associated:
    n/a
    Design:Animals were genotyped using the Illumina OvineSNP50 BeadChip and analyzed for number born alive. A total of 44,801 SNPs were used for analysis.
    Analysis:A repeatability threshold animal model was used.
    Software:ASReml, SAS, PLINK, Haploview
    Notes: 
    Links:Edit

     Reference
    Authors:Abdoli R, Mirhoseini S Z, Ghavi Hossein-Zadeh N, Zamani P, Gondro C
    Affiliation:School of Environmental and Rural Science, University of New England, Armidale, NSW, 2351, Australia
    Title:Genome-wide association study to identify genomic regions affecting prolificacy in Lori-Bakhtiari sheep
    Journal:Animal genetics, 2018, 49(5):488-491
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #30079564
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  • Cite this Data:

    Animal QTLdb: QTL160622 was published in 2018, and was curated into QTLdb on 2018-08-15. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:160622

     

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