| QTL Map Information |
|---|
| Chromosome: | 19 |
| QTL Peak Location: | 6.60 (cM) |
| QTL Span: | 6.60-6.60 (cM)
5.6-5.6 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs424518440 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 2.48E-6 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #167267
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Animals were Lori-Bakhtiari sheep in Iran. |
| Breeds associated:
n/a
|
| Design: | Animals were genotyped using the Illumina OvineSNP50 BeadChip and analyzed for birth weight. A total of 41,323 SNPs were used for analysis. |
| Analysis: | For GWAS, the SNPs were tested individually, and the first five principal components were included as covariates in the model to consider population structure. |
| Software: | PLINK, R software, Haploview, GCTA, SAS |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Ghasemi M, Zamani P, Vatankhah M, Abdoli R |
| Affiliation: | Department of Animal Science, Faculty of Agriculture, Bu-Ali Sina University, Hamedan, Iran |
| Title: | Genome-wide association study of birth weight in sheep |
| Journal: | Animal : an international journal of animal bioscience, 2019, 13(9):1797-1803 |
| Links: |
PubMed | Abstract | List all data
| Edit |
User inputs on reference #30616710
Add your comments
Note similar findings
Note contradictions
|
