| QTL Map Information |
|---|
| Chromosome: | 16 |
| QTL Peak Location: | 30.64 (cM) |
| QTL Span: | 30.64-30.64 (cM)
25.9-25.9 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs426380155 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | n/a |
| Test base: | n/a |
| Threshold significance level: | n/a |
 |
P_values | 1.61E-07 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Forty ram lambs and sires were selected from 8 US Katahdin farms. Animals were chosen to be as unrelated as possible. |
| Breeds associated:
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| Design: | The phenotypes used in this study were estimated breeding values for fecal egg counts. Genotyping was done with the Applied BiosystemsTM AxiomTM Ovine Genotyping Array (50K). |
| Analysis: | Following quality control, a linear regression and single locus mixed-model were used for GWAS. |
| Software: | PLINK v1.90 and SNP and Variation Suite (SVS) |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | GM Becker, KM Davenport, JM Burke, RM Lewis, JE Miller, JL Morgan, DR Notter, BM Murdoch |
| Affiliation: | Department of Animal and Veterinary Science, University of Idaho, Moscow, 83844, United States |
| Title: | Genome-wide association study to identify genetic loci associated with gastrointestinal nematode resistance in Katahdin sheep |
| Journal: | Animal Genetics, 2020, January 3, 2020 Early View |
| Links: |
PubMed | Abstract | List all data
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