| QTL Map Information |
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| Chromosome: | 25 |
| QTL Peak Location: | 2.39 (cM) |
| QTL Span: | 2.39-2.39 (cM)
1.6-1.6 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs409049380 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Experiment-wise |
| Threshold significance level: | Significant |
 |
FDR | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | GALNT2 (polypeptide N-acetylgalactosaminyltransferase 2) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
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| QTL Experiment in Brief |
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| Animals: | Animals were ewes from a variety of sheep breeds: Dorset, Polypay, Katahdin, Finnsheep x Dorset, 1/4 East Friesian x 3/4 Dorset, Romanov x Katahdin, and Finnsheep. |
| Breeds associated:
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| Design: | Animals were genotyped using the Illumina Ovine Infinium HD SNP BeadChip and analyzed for out-of-season lambing. |
| Analysis: | GWAS was performed within the Dorset and Polypay breeds, as well as across breeds. Recessive mixed models were used. |
| Software: | SVS v8.7.2 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Posbergh CJ, Thonney ML, Huson HJ |
| Affiliation: | Department of Animal Science, Cornell University, Ithaca, NY |
| Title: | Genomic Approaches Identify Novel Gene Associations with Out of Season Lambing in Sheep |
| Journal: | Journal of Heredity, 2019, 110(5): 577-586 |
| Links: |
PubMed | Abstract | List all data
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