| QTL Map Information |
|---|
| Chromosome: | 1 |
| QTL Peak Location: | 293.04 (cM) |
| QTL Span: | 293.04-293.04 (cM)
248.2-248.2 (Mbp) |
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Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs420083564 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 2.22E-6 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | PIK3CB (phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
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| QTL Experiment in Brief |
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| Animals: | Animals were Columbia, Polypay, and Rambouillet sheep. |
| Breeds associated:
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| Design: | Animals were genotyped using the Illumina OVineSNP50 Infinium BeadChip and analyzed for congenital entropion. |
| Analysis: | Logistic regression methods were used, with an additional step to assess fit for additive allelic, recessive, dominant, and genotypic inheritance models. |
| Software: | PLINK, SAS |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Mousel MR, Reynolds JO, White SN |
| Affiliation: | Animal Disease Research Unit, Agricultural Research Service, Department of Agriculture, Pullman, WA, United States of America; Department of Veterinary Microbiology and Pathology, Washington State University, Pullman, WA, United States of America |
| Title: | Genome-Wide Association Identifies SLC2A9 and NLN Gene Regions as Associated with Entropion in Domestic Sheep |
| Journal: | PloS one, 2016, 10(6): e0128909 |
| Links: |
PubMed | Abstract | List all data
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