Release 56
(Apr 24, 2025)

QTL 213369 Description:

 Trait Information
Trait name: Somatic cell score Vertebrate Trait Ontology: Milk somatic cell quantity
Reported name: (n/a) Product Trait Ontology: Milk somatic cell count
Symbol: SCS Clinical Measurement Ontology: Milk somatic cell score
 QTL Map Information
Chromosome:6
QTL Peak Location:48.76 (cM)
QTL Span:48.76-48.76 (cM)
36.6-36.6 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs161844011
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:Mendelian
Test base:Genome-wise
Threshold significance level:Significant
P_values0.003
Dominance effect:n/a
Additive effect:n/a
Associated Gene:SPP1 (secreted phosphoprotein 1)
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Sarda sheep.
     Breeds associated:
    Design:Animals were genotyped for SNPs in the SPP1, POFUT1, and PRLR genes and analyzed for milk yield, composition, and coagulation traits.
    Analysis:Mixed models were used.
    Software:Haploview, SAS
    Notes: 
    Links:Edit

     Reference
    Authors:Dettori ML, Pazzola M, Petretto E, Vacca GM
    Affiliation:Department of Veterinary Medicine, University of Sassari, via Vienna 2, 07100 Sassari, Italy
    Title:Association Analysis between SPP1, POFUT1 and PRLR Gene Variation and Milk Yield, Composition and Coagulation Traits in Sarda Sheep.
    Journal:Animals : an open access journal from MDPI, 2020, 10(7):1216
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #32708940
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  • Cite this Data:

    Animal QTLdb: QTL213369 was published in 2020, and was curated into QTLdb on 2020-09-17. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:213369

     

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