| QTL Map Information |
|---|
| Chromosome: | 13 |
| QTL Peak Location: | 31.58 (cM) |
| QTL Span: | 31.58-31.58 (cM)
20.8-20.8 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs401963094 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | 0.0003 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | PLXDC2 (plexin domain containing 2) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Lori-Bakhtiari sheep. |
| Breeds associated:
n/a
|
| Design: | Animals were genotyped using the Illumina OvineSNP50 Beadchip and analyzed for body weight at various ages. A total of 41,323 SNPs were used for analysis. |
| Analysis: | De-regressed EBVs were considered as pseudo-phenotypes, and the GWAS model contained random SNP effects and the first five principal components as covariates to avoid biases due to possible population stratification. |
| Software: | R software, PLINK, GCTA |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Almasi M, Zamani P, Mirhoseini SZ, Moradi MH |
| Affiliation: | Department of Animal Science, Faculty of Agriculture, Arak University, Arak, Iran |
| Title: | Genome-wide association study for postweaning weight traits in Lori-Bakhtiari sheep |
| Journal: | Tropical animal health and production, 2021, 53(1): 163 |
| Links: |
PubMed | Abstract | List all data
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