Release 56
(Apr 24, 2025)

QTL 238150 Description:

 Trait Information
Trait name: Temperament Vertebrate Trait Ontology: Behavior trait
Reported name: isolation box test score Product Trait Ontology: n/a
Symbol: TMP Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:10
QTL Peak Location:n/a
QTL Span:n/a
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs17193181
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:n/a
Test base:Comparison-wise
Threshold significance level:Significant
P_values0.02
Dominance effect:n/a
Additive effect:n/a
Associated Gene:HTR2A (5-hydroxytryptamine receptor 2A)
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Merino sheep.
     Breeds associated:
    Design:SNPs in target genes were identified and analyzed for association with temperament-related traits. Initial analysis was performed in a flock that had been selected on emotional reactivity, then 8 SNPs were used in a follow-up analysis on an unselected flock.
    Analysis:A Kruskal-Wallis test was used to analyze the differences in phenotype between genotype groups.
    Software:R-studio
    Notes: 
    Links:Edit

     Reference
    Authors:Ding L, Maloney SK, Wang M, Rodger J, Chen L, Blache D
    Affiliation:School of Agriculture and Environment, The University of Western Australia, Crawley, Western Australia, Australia
    Title:Association between temperament related traits and single nucleotide polymorphisms in the serotonin and oxytocin systems in Merino sheep
    Journal:Genes, brain, and behavior, 2021, 20(3): e12714
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  

     Additional Information
    Comments:commercial flock
    User inputs on reference #33161622
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  • Cite this Data:

    Animal QTLdb: QTL238150 was published in 2021, and was curated into QTLdb on 2021-10-07. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:238150

     

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