| QTL Map Information |
|---|
| Chromosome: | 4 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
51.2-51.2 (Mbp) |
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Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs600370085 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | n/a |
| Test base: | n/a |
| Threshold significance level: | Significant |
 |
P_values | 0.017 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | SFRP4 (secreted frizzled related protein 4) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Duolang sheep. |
| Breeds associated:
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| Design: | Following genome sequencing, selective sweep analysis was performed to identify regions potentially associated with an increase in lumbar vertebra number. |
| Analysis: | Regions with high fixation index values and low Pi values were used to identify candidate selective sweeps. PCR-SSCP was used to detect SNPs in a candidate region. |
| Software: | SAMtools, ANNOVAR, Arlequin v3.1 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Li C, Liu K, Dai J, Li X, Liu X, Ni W, Li H, Wang D, Qiao J, Wang Y, Cui Y, Xia X, Hu S |
| Affiliation: | College of Animal Science and Technology, Shihezi University, Shihezi, Xinjiang 832003, China; College of Life Science, Shihezi University, Shihezi, Xinjiang 832003, China |
| Title: | Whole-genome resequencing to investigate the determinants of the multi-lumbar vertebrae trait in sheep |
| Journal: | Gene, 2022, 809: 146020 |
| Links: |
PubMed | Abstract | List all data
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