| QTL Map Information |
|---|
| Chromosome: | 3 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
92.8-92.8 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs417859328 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | CNV |
| Analysis type: | QTL |
| Model tested: | n/a |
| Test base: | Experiment-wise |
| Threshold significance level: | Significant |
 |
FDR | 0.01961 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Santa Inês sheep. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina OvineSNP50 BeadChip. CNV regions were analyzed for association with growth, feed efficiency, and carcass traits. A total of 46,535 SNPs were used for analysis. |
| Analysis: | CNV-based GWAS was performed using a linear mixed model. |
| Software: | PREGSF90, PennCNV, CNVRanger R/Bioconductor package |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Ladeira GC, Pilonetto F, Fernandes AC, Bóscollo PP, Dauria BD, Titto CG, Coutinho LL, E Silva FF, Pinto LFB, Mourão GB |
| Affiliation: | Department of Animal Science, Luiz de Queiroz College of Agriculture, University of São Paulo (ESALQ/USP), Piracicaba, Brazil |
| Title: | CNV detection and their association with growth, efficiency and carcass traits in Santa Inês sheep |
| Journal: | Journal of animal breeding and genetics, 2022, 139(4):476-487 |
| Links: |
PubMed | Abstract | List all data
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