Release 56
(Apr 24, 2025)

QTL 261732 Description:

 Trait Information
Trait name: Fecal egg count Vertebrate Trait Ontology: Response to parasitic infection trait
Reported name: (n/a) Product Trait Ontology: n/a
Symbol: FECGEN Clinical Measurement Ontology: Fecal parasite egg count
 QTL Map Information
Chromosome:7
QTL Peak Location:n/a
QTL Span:n/a
83.8-83.8 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs402818177
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:n/a
Test base:Chromosome-wise
Threshold significance level:Significant
FDR0.0280
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

User inputs on QTL #261732
  • Add your annotations
  • Add your comments
  • Report problems
  •  QTL Experiment in Brief
    Animals:Animals were Corriedale sheep.
     Breeds associated:
    Design:Animals were genotyped using either a 170-SNP 507-SNP, or 50K SNP chip, and association analysis for fecal egg count was performed separately for each chip.
    Analysis:A univariate animal model was used.
    Software:BLUPF90, POSTGSF90
    Notes: 
    Links:Edit

     Reference
    Authors:Carracelas B, Navajas EA, Vera B, Ciappesoni G
    Affiliation:Department of Animal Breeding, Instituto Nacional de Investigación Agropecuaria, INIA Las Brujas, Ruta 48 Km 10, Canelones 90100, Uruguay
    Title:Genome-Wide Association Study of Parasite Resistance to Gastrointestinal Nematodes in Corriedale Sheep
    Journal:Genes, 2022, 13(9):1548
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  

     Additional Information
    Comments:507-SNP chip
    User inputs on reference #36140716
  • Add your comments
  • Note similar findings
  • Note contradictions
  • Cite this Data:

    Animal QTLdb: QTL261732 was published in 2022, and was curated into QTLdb on 2022-10-18. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:261732

     

    © 2003-2025: USA · USDA · NRPSP8 · Program to Accelerate Animal Genomics Applications. Contact: Bioinformatics Team