| QTL Map Information |
|---|
| Chromosome: | 6 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
104.4-104.4 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs417736092 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | n/a |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 2.648E-7 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | EVC2 (EvC ciliary complex subunit 2) |
| Cis/Trans acting type: |  |
| Links:
Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #285929
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Animals were Karachaevsky sheep. |
| Breeds associated:
n/a
|
| Design: | Animals were genotyped using the Illumina Ovine Infinium HD BeadChip, and GWAS were performed for production traits. A total of 508,448 SNPs were used for analysis. |
| Analysis: | The genome-wide association study was performed using the PLINK V.1.07 software for quantitative traits. It is based on the assessment of the significance of SNPs’ influence on quantitative meat production trait variability. |
| Software: | PLINK v1.07 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Krivoruchko A, Likhovid A, Kanibolotskaya A, Saprikina T, Safaryan E, Yatsyk O |
| Affiliation: | Federal Seфey Budgetary Scientific Institution, North Caucasian Federal Scientific Agrarian Centre, 356241 Mikhailovsk, Russia |
| Title: | Genome-Wide Search for Associations with Meat Production Parameters in Karachaevsky Sheep Breed Using the Illumina BeadChip 600 K |
| Journal: | Genes, 2023, 14(6):1288 |
| Links: |
PubMed | Abstract | List all data
| Edit |
User inputs on reference #37372468
Add your comments
Note similar findings
Note contradictions
|
