Pig QTL Database

Release 56
(Apr 24, 2025)

. . . from browsing trait ontology

References

On trait: Ham weight

A. Stratil, M. Van Poucke, H. Bartenschlager, A. Knoll, M. Yerle, L. J. Peelman, M. Kopecny (2006). Porcine OGN and ASPN: mapping, polymorphisms and use for quantitative trait loci identification for growth and carcass traits in a Meishan x Pietrain intercross Animal Genetics,37: 415-418. [see all QTL by this paper]
Boysen, T J; Tetens, J; Thaller, G (2010). Detection of a quantitative trait locus for ham weight with polar overdominance near the orthologue of the callipyge locus in an experimental pig F2 population J Anim Sci,88(10): 3167-72. [see all QTL by this paper]
Cepica S, Zambonelli P, Weisz F, Bigi M, Knoll A, Vykoukalova Z, Masopust M, Gallo M, Buttazzoni L, Davoli R (2013). Association mapping of quantitative trait loci for carcass and meat quality traits at the central part of chromosome 2 in Italian Large White pigs Meat science,95(2): 368-75. [see all QTL by this paper]
Cepica, S; Bartenschlager, H; Geldermann, H (2007). Mapping of QTL on chromosome X for fat deposition, muscling and growth traits in a wild boar x Meishan F2 family using a high-density gene map. Animal genetics,38 (6): 634-8. [see all QTL by this paper]
Cherel P, Pires J, Glenisson J, Milan D, Iannuccelli N, Herault F, Damon M, Le Roy P (2011). Joint analysis of quantitative trait loci and major-effect causative mutations affecting meat quality and carcass composition traits in pigs. BMC genetics,12:76. [see all QTL by this paper]
Choi I, Steibel JP, Bates RO, Raney NE, Rumph JM, Ernst CW (2011). Identification of Carcass and Meat Quality QTL in an F(2) Duroc x Pietrain Pig Resource Population Using Different Least-Squares Analysis Models. Frontiers in genetics,2: 18. [see all QTL by this paper]
D. B. Edwards, C. W. Ernst, N. E. Raney, M. E. Doumit, M. D. Hoge, and R. O. Bates (2008). Quantitative trait locus mapping in an F2 Duroc x Pietrain resource population: II. Carcass and meat quality traits J Anim Sci,86:254-266. [see all QTL by this paper]
Davoli R, Braglia S, Valastro V, Annarratone C, Comella M, Zambonelli P, Nisi I, Gallo M, Buttazzoni L, Russo V (2012). Analysis of MC4R polymorphism in Italian Large White and Italian Duroc pigs: association with carcass traits. Meat science,90 (4): 887-92. [see all QTL by this paper]
Delpuech E, Aliakbari A, Labrune Y, FÃ¨ve K, Billon Y, Gilbert H, Riquet J. (2021). Identification of genomic regions affecting production traits in pigs divergently selected for feed efficiency Genetics, Selection, Evolution : GSE,53(1): 49. [see all QTL by this paper]
Demeure, O; Sanchez, M P; Riquet, J; Iannuccelli, N; Demars, J; Feve, K; Kernaleguen, L; Gogue, J; Billon, Y; Caritez, J C; Mila (2005). Exclusion of the swine leukocyte antigens as candidate region and reduction of the position interval for the Sus scrofa chromosome 7 QTL affecting growth and fatness. J Anim Sci,83 (9): 1979-87. [see all QTL by this paper]
Duthie, C; Simm, G; Doeschl-Wilson, A; Kalm, E; Knap, P W; Roehe, R (2008). Quantitative trait loci for chemical body composition traits in pigs and their positional associations with body tissues, growth and feed intake. Animal genetics,39 (2): 130-40. [see all QTL by this paper]
Estelle, J; Mercade, A; Noguera, J L; Perez-Enciso, M; Ovilo, C; Sanchez, A; Folch, J M (2005). Effect of the porcine IGF2-intron3-G3072A substitution in an outbred Large White population and in an Iberian x Landrace cross. J Anim Sci,83 (12): 2723-8. [see all QTL by this paper]
Fontanesi L, Buttazzoni L, Scotti E, Russo V (2013). Confirmation of the association between a single nucleotide polymorphism in the porcine LDHA gene and average daily gain and correlated traits in Italian Large White pigs Animal genetics,43(5): 649-50. [see all QTL by this paper]
Fontanesi L, Speroni C, Buttazzoni L, Scotti E, Dall'Olio, S, Costa N, Davoli R, Russo V (2010). The insulin-like growth factor 2 (IGF2) gene intron3-g.3072G>A polymorphism is not the only Sus scrofa chromosome 2p mutation affecting meat production and carcass traits in pigs: evidence from the effects of a cathepsin D (CTSD) gene polym J Anim Sci,88(7): 2235-45. [see all QTL by this paper]
Fontanesi, Luca; Schiavo, Giuseppina; Gallo, Maurizio; Baiocco, Claudio; Galimberti, Giuliano; Bovo, Samuele; Russo, Vincenzo; Buttazzoni, Luca; (2017). Genome wide association study for ham weight loss at first salting in Italian Large White pigs: towards the molecular dissection of a key trait for dry-cured ham production Animal Genetics,48(1):103-107. [see all QTL by this paper]
G. Yue, A. Stratil, M. Kopecny, D. Schröffelova, J. Schröffel Jr., J. Hojny, S Cepica, R. Davoli, P. Zambonelli, C. Brunsch, I. (2003). Linkage and QTL mapping for Sus scrofa chromosome 6. J Anim Breed Genet,120(1); 45-55. [see all QTL by this paper]
G. Yue, A. Stratil, S. Cepica, J. Schröffel Jr., d. Schröffelova, L. Fontanesi, M. Cagnazzo, G. Moser, H. Bartenschlager, G. Rei (2003). Linkage and QTL mapping for Sus scrofa chromosome 7. J Anim Breed Genet,120(1). [see all QTL by this paper]
G. Yue, J. Schröffel Jr., G. Moser, H. Bartenschlager, G. Reiner, H, Geldermann (2003). Linkage and QTL mapping for Sus scrofa chromosome 12. J Anim Breed Genet,120(1) 95-102. [see all QTL by this paper]
G. Yue, V. Russo, R. Davoli, I. Sternstein, C. Brunsch, D. Schroffelova, A. Stratil, G. Moser, H. Bartenschlager, G. Reiner, H. (2003). Linkage and QTL mapping for Sus scrofa chromosome 13. J Anim Breed Genet,120(1): 103-110. [see all QTL by this paper]
H. Geldermann, E. Muller, G. Moser, G. Reiner, H. Bartenschlager, S. Cepica, A. Stratil, J. Kuryl, C. Moran, R. Davoli and C. Brunsch (2003). Genome-wide linkage and QTL mapping in porcine F2 families. J Anim Breed Genet,120:363-393. [see all QTL by this paper]
Heuven, Henri CM; van Wijk, Rik HJ; Dibbits, Bert; van Kampen, Tony A; Knol, Egbert F; Bovenhuis, Henk (2009). Mapping carcass and meat quality QTL on Sus Scrofa chromosome 2 in commercial finishing pigs. Genetics, Selection, Evolution : GSE,41 (1): 4. [see all QTL by this paper]
Kayan A, Cinar MU, Uddin MJ, Phatsara C, Wimmers K, Ponsuksili S, Tesfaye D, Looft C, Juengst H, Tholen E, Schellander K (2011). Polymorphism and expression of the porcine Tenascin C gene associated with meat and carcass quality. Meat science,89(1):76-83. [see all QTL by this paper]
M. Dragos-Wendrich, G. Moser, H. Bartenschlager, G. Reiner, H. Geldermann (2003). Linkage and QTL mapping for Sus scrofa chromosome 10. J Anim Breed Genet,120(1): 82-88. [see all QTL by this paper]
M. Dragos-Wendrich, I. Sternstein, C. Brunsch, G. Moser, H. Bartenschlager, G. Reiner, H. Geldermann (2003). Linkage and QTL mapping for Sus scrofa chromosome 14. J Anim Breed Genet,120(1): 111-118. [see all QTL by this paper]
M. Mohrmann, R. Roehe, P. W. Knap, H. Looft, G. S. Plastow, E. Kalm (2006). Quantitative trait loci associated with AutoFOM grading characteristics, carcass cuts and chemical body composition during growth of Sus scrofa Animal Genetics,37: 435-443. [see all QTL by this paper]
M.P. Sanchez, J. Riquet, N. Iannuccelli, J. Gogue, Y. Billon, O. Demeure, J.C. Caritez, G. Burgaud, K. Feve, M. Bonnet, C. Pery, (2006). Effects of quantitative trait loci on cgromosomes 1,2,4, and 7 on growth carcass, and meat quality traits in backcross Meishan x Large White pigs J Anim Sci,84: 526-537. [see all QTL by this paper]
Ma J, Gilbert H, Iannuccelli N, Duan Y, Guo B, Huang W, Ma H, Riquet J, Bidanel JP, Huang L, Milan D (2013). Fine mapping of fatness QTL on porcine chromosome X and analyses of three positional candidate genes BMC genetics,14: 46. [see all QTL by this paper]
MartÃnez-Montes AM, FernÃ¡ndez A, PÃ©rez-Montarelo D, Alves E, BenÃtez RM, NuÃ±ez Y, Ã“vilo C, IbaÃ±ez-Escriche N, Folch JM, FernÃ¡ndez AI (2017). Using RNA-Seq SNP data to reveal potential causal mutations related to pig production traits and RNA editing Animal genetics,48(2):151-165. [see all QTL by this paper]
MartÃnez-Montes ÃM, FernÃ¡ndez A, MuÃ±oz M, Noguera JL, Folch JM, FernÃ¡ndez AI (2018). Using genome wide association studies to identify common QTL regions in three different genetic backgrounds based on Iberian pig breed PloS one,13(3): e0190184. [see all QTL by this paper]
Mercade, Anna; Estelle, Jordi; Noguera, Jose L; Folch, Josep M; Varona, Luis; Silio, Luis; Sanchez, Armand; Perez-Enciso, Miguel (2005). On growth, fatness, and form: a further look at porcine chromosome 4 in an Iberian x Landrace cross. Mammalian genome,16 (5): 374-82. [see all QTL by this paper]
Milan D, Bidanel JP, Iannuccelli N, Riquet J, Amigues Y, Gruand J, Le Roy P,Renard C, Chevalet C. (2002). Detection of quantitative trait loci for carcass composition traits in pigs. Genet Sel Evol,Nov-Dec;34(6):705-28.. [see all QTL by this paper]
O Vidal, JL Noguera, M Amills, L Varona, M Gil, N Jimenez, G Davalos, JM Folch, A Sanchez (2005). Identification of carcass and meat quality quantitative trait loci in a Landrace pig population selected for growth and leanness J Anim Sci,83 (2): 293-300. [see all QTL by this paper]
P. Beeckmann, G. Moser, H. Bartenschlager, G. Reiner, and H. Geldermann (2003). Linkage and QTL mapping for Sus scrofa chromosome 8. J Anim Breed Genet,120(1); 66-73. [see all QTL by this paper]
P. Beeckmann, J. Schröffel Jr, G. Moser, H. Bartenschlager, G. Reiner, and H. Geldermann (2003). Linkage and QTL mapping for Sus scrofa chromosome 1. J Anim Breed Genet,120(1):1-10. [see all QTL by this paper]
P. Beeckmann, J. Schröffel Jr., G. Moser, H. Bartenschlager, G. Reiner and H. Geldermann (2003). Linkage and QTL mapping for Sus scrofa Chromosome 3. J Anim Breed Genet,120(1):20-27. [see all QTL by this paper]
Paulina G. Eusebi, Rayner Gonzï¿½lez-Prendes, Raquel Quintanilla, Joan Tibau, Taina Figueiredo Cardoso, Alex Clop, Marcel Amills (2017). A genome-wide association analysis for carcass traits in a commercial Duroc pig population Animal Genetics,48(4):466-469.. [see all QTL by this paper]
Perez-Enciso, M; Mercade, A; Bidanel, J P; Geldermann, H; Cepica, S; Bartenschlager, H; Varona, L; Milan, D; Folch, J M (2005). Large-scale, multibreed, multitrait analyses of quantitative trait loci experiments: the case of porcine X chromosome. J Anim Sci,83 (10): 2289-96. [see all QTL by this paper]
PiÃ³rkowska K, MaÅ‚opolska M, Ropka-Molik K, Szyndler-NÄ™dza M, Wiechniak A, Å»ukowski K, Lambert B, Tyra M (2020). Evaluation of SCD, ACACA and FASN Mutations: Effects on Pork Quality and Other Production Traits in Pigs Selected Based on RNA-Seq Results Animals : an open access journal from MDPI,10(1):E123. [see all QTL by this paper]
Russo V, Fontanesi L, Scotti E, Beretti F, Davoli R, Nanni Costa L, Virgilli R, Buttazzoni L (2008). Single nucleotide polymorphisms in several porcine cathepsin genes are associated with growth, carcass, and production traits in Italian Large White pigs J Anim Sci,86(12): 3300-14. [see all QTL by this paper]
S. Cepica, A. Stratil, M. Kopecny, P. Blazkova, J. Schröffel Jr, R. Davoli, L. Fontanesi, G. Reiner, H. Bartenshlager, G. Moser (2003). Linkage and QTL mapping for Sus scrofa chromosome 4.. J Anim Breed Genet,120(1) 28-37. [see all QTL by this paper]
S. Cepica, G. Reiner, H. Bartenschlager, G. Moser, H. Geldermann (2003). Linkage and QTL mapping for Sus scrofa chromosome X. J Anim Breed Genet,120(1): 144-151. [see all QTL by this paper]
S. S. Lee, Y. Chen, C. Moran, S. Cepica, G. Reiner, H. Bartenschlager, G. Moser and H. Geldermann (2003). LInkage and QTL mapping for Sus scrofa chromosome 2. J Anim Breed Genet,120(1): 11-19. [see all QTL by this paper]
Sanchez MP, Tribout T, Iannuccelli N, Bouffaud M, Servin B, Tenghe A, Dehais P, Muller N, Del Schneider MP, Mercat MJ, Rogel-Gaillard C, Milan D, Bidanel JP, Gilbert H (2014). A genome-wide association study of production traits in a commercial population of Large White pigs: evidence of haplotypes affecting meat quality Genetics, Selection, Evolution : GSE,46: 12. [see all QTL by this paper]
Shao GC, Luo LF, Jiang SW, Deng CY, Xiong YZ, Li FE (2011). A C/T mutation in microRNA target sites in BMP5 gene is potentially associated with fatness in pigs. Meat science,87(3): 299-303. [see all QTL by this paper]
Slawinska, A; Siwek, M; Knol, E F; Roelofs-Prins, D T; van Wijk, H J; Dibbits, B; Bednarczyk, M; (2009). Validation of the QTL on SSC4 for meat and carcass quality traits in a commercial crossbred pig population. Journal of animal breeding and genetics,126 (1): 43-51. [see all QTL by this paper]
Weisz F, Bartenschlager H, Knoll A, Mileham A, Deeb N, Geldermann H, Cepica S (2012). Association analyses of porcine SERPINE1 reveal sex-specific effects on muscling, growth, fat accretion and meat quality Animal genetics,43(5): 614-9. [see all QTL by this paper]
Wimmers K, Murani E, Te Pas MF, Chang KC, Davoli R, Merks JW, Henne H, Muraniova M, da Costa N, Harlizius B, Schellander K, Boll (2007). Associations of functional candidate genes derived from gene-expression profiles of prenatal porcine muscle tissue with meat quality and muscle deposition Animal Genetics,38(5): 474-84. [see all QTL by this paper]