| QTL Map Information |
|---|
| Chromosome: | 5 |
| QTL Peak Location: | 76.02 (cM) |
| QTL Span: | 75.82-76.21 (cM)
65.8-66.1 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | rs81384722 |
| Peak: | rs80985094 |
| Lower, "Significant": | rs80985094 |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | QTL |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
VARIANCE | 0.14% | | P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Duroc, Landrace, and Yorkshire pigs. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina PorcineSNP60 BeadChip or GeneSeek custom SNP arrays and analyzed for conformation traits. |
| Analysis: | A mixed linear model was used. |
| Software: | GCTA, DMU, Beagle, METAL |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Le TH, Christensen OF, Nielsen B, Sahana G |
| Affiliation: | Department of Molecular Biology and Genetics, Center for Quantitative Genetics and Genomics, Aarhus University, Tjele, Denmark |
| Title: | Genome-wide association study for conformation traits in three Danish pig breeds |
| Journal: | Genetics, Selection, Evolution : GSE, 2017, 49(1): 12 |
| Links: |
PubMed | Abstract | List all data
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