Release 56
(Apr 24, 2025)

QTL 126680 Description:

 Trait Information
Trait name: Teat number, maximum per side Vertebrate Trait Ontology: Nipple quantity
Reported name: (n/a) Product Trait Ontology: n/a
Symbol: TNMPS Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:13
QTL Peak Location:87.00 (cM)
QTL Span:86.77-87.24 (cM)
136.6-137.4 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":rs81332322
Peak:rs80919225
Lower, "Significant":rs81448371
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:QTL
Model tested:Mendelian
Test base:n/a
Threshold significance level:Significant
VARIANCE1.26
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

User inputs on QTL #126680
  • Add your annotations
  • Add your comments
  • Report problems
  •  QTL Experiment in Brief
    Animals:Pigs were from a 1/2 Landrace - 1/4 Duroc - 1/4 Yorkshire composite population.
     Breeds associated:
    Design:Animals were genotyped using the Illumina PorcineSNP60 BeadChip and analyzed for teat number traits. A total of 41,148 SNPs were used for analysis.
    Analysis:BayesC methodology was used.
    Software:GENSEL, WOMBAT
    Notes: 
    Links:Edit

     Reference
    Authors:Rohrer Gary A, Nonneman Dan J
    Affiliation:U.S. Meat Animal Research Center, USDA, Agricultural Research Service, Clay Center, NE, USA
    Title:Genetic analysis of teat number in pigs reveals some developmental pathways independent of vertebra number and several loci which only affect a specific side
    Journal:Genetics, Selection, Evolution : GSE, 2017, 49(1): 4
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #28093083
  • Add your comments
  • Note similar findings
  • Note contradictions
  • Cite this Data:

    Animal QTLdb: QTL126680 was published in 2017, and was curated into QTLdb on 2017-03-31. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:126680

     

    © 2003-2025: USA · USDA · NRPSP8 · Program to Accelerate Animal Genomics Applications. Contact: Bioinformatics Team