| QTL Map Information |
|---|
| Chromosome: | 13 |
| QTL Peak Location: | 111.56 (cM) |
| QTL Span: | 111.56-111.56 (cM)
177.6-177.6 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs80876742 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
VARIANCE | 0.09 | | P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | ROBO2 (roundabout guidance receptor 2 ) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were purebred Duroc pigs. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina PorcineSNP60 BeadChip and analyzed for fatty acid composition in backfat and intramuscular fat. A total of 38,119 SNPs were used for analysis. |
| Analysis: | Regression analyses were performed using genome-wide mixed models and the Wald test. |
| Software: | ASReml, PLINK |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Sato S, Uemoto Y, Kikuchi T, Egawa S, Kohira K, Saito T, Sakuma H, Miyashita S, Arata S, Suzuki K |
| Affiliation: | Graduate School of Agricultural Science, Tohoku University, Sendai, Miyagi, Japan |
| Title: | Genome-wide association studies reveal additional related loci for fatty acid composition in a Duroc pig multigenerational population |
| Journal: | Animal science journal , 2017, 88(10):1482-1490 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | Longissimus muscle; IMF |
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