Release 56
(Apr 24, 2025)

QTL 135426 Description:

 Trait Information
Trait name: Intermuscular fat content Vertebrate Trait Ontology: Intermuscular adipose amount
Reported name: (n/a) Product Trait Ontology: n/a
Symbol: IMFAT Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:1
QTL Peak Location:39.42 (cM)
QTL Span:39.42-39.42 (cM)
72.5-72.5 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs80994097
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:Mendelian
Test base:Experiment-wise
Threshold significance level:Suggestive
P_values0.068
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Italian Large White pigs.
     Breeds associated:
    Design:Animals were genotyped using the Illumina PorcineSNP60 BeadChip and analyzed for visible intermuscular fat in the leg. A total of 37,843 SNPs were used for analysis.
    Analysis:A linear mixed model was used.
    Software:GEMMA, GenABEL
    Notes: 
    Links:Edit

     Reference
    Authors:Fontanesi L, Schiavo G, Galimberti G, Bovo S, Russo V, Gallo M, Buttazzoni L
    Affiliation:Department of Agricultural and Food Sciences Division of Animal Sciences, University of Bologna, Viale Fanin 46, 40127 Bologna, Italy
    Title:A genome-wide association study for a proxy of intermuscular fat level in the Italian Large White breed identifies genomic regions affecting an important quality parameter for dry-cured hams.
    Journal:Animal Genetics, 2017, 48(4):459-465
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #28696026
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  • Cite this Data:

    Animal QTLdb: QTL135426 was published in 2017, and was curated into QTLdb on 2017-06-13. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:135426

     

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