Release 56
(Apr 24, 2025)

This linkage-map based data has been obsolete
(see Release notes 51, 52, 53). Information
provided here is only for retrospective online
support of publications that used this data.

QTL 15115 Description:

 Trait Information
Trait name: Phosphate level Vertebrate Trait Ontology: Blood phosphate amount
Reported name: Phosphate level Product Trait Ontology: n/a
Symbol: PHOS Clinical Measurement Ontology: Serum phosphate level
 QTL Map Information
Chromosome:12
QTL Peak Location:63 (cM)
QTL Span:40 - 93 (cM)
15.8-53.6 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":SW957
Peak:
Lower, "Significant":S0106
Lower, "Suggestive":n/a
Marker type:Microsatellites
Analysis type:QTL
Model tested:Mendelian
Test base:Genome-wise
Threshold significance level:Suggestive
LOD_score2.5
F_Stat11.7
VARIANCE3.2
Dominance effect:n/a
Additive effect:-0.218
Associated Gene:n/a
Cis/Trans acting type:
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

User inputs on QTL #15115
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  •  QTL Experiment in Brief
    Animals:Animals were from an KNP x Landrace resource population
     Breeds associated:
    n/a
    Design:Animals were genotyped for 165 polymorphic markers and analyzed for clinical-chemical traits.
    Analysis:Least squares regression interval mapping was performed.
    Software:CRI-MAP, GridQTL
    Notes: 
    Links:Edit

     Reference
    Authors:Yoo CK, Cho IC, Lee JB, Jung EJ, Lim HT, Han SH, Lee SS, Ko MS, Kang T, Hwang JH, Park YS, Park HB.
    Affiliation:Gyeongsang National University.
    Title:QTL analysis of clinical-chemical traits in an F2 intercross between Landrace and Korean native pigs
    Journal:Physiol Genomics, 2012, Apr 10. [Epub ahead of print]
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  

     Additional Information
    Comments:GEMMA
    User inputs on reference #22496488
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  • Cite this Data:

    Animal QTLdb: QTL15115 was published in 2012, and was curated into QTLdb on 2012-03-04. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:15115

     

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