| QTL Map Information |
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| Chromosome: | 10 |
| QTL Peak Location: | 105.14 (cM) |
| QTL Span: | 105.14-105.14 (cM)
57.6-57.6 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs81274366 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 3.00E-5 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
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| QTL Experiment in Brief |
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| Animals: | Animals were Erhualian, Sutai, and Yorkshire pigs. |
| Breeds associated:
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| Design: | Animals were genotyped using the Illumina PorcineSNP60 BeadChip and analyzed for litter size traits. A total of 28,020 SNPs were used for GWAS. |
| Analysis: | SNP associations with TNB and NBA were analyzed using the genome-wide efficient mixed model association analysis with a standard univariate linear mixed model. |
| Software: | PLINK, DMU, SAS, R software |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Ma X, Li P H, Zhu M X, He L C, Sui S P, Gao S, Su G S, Ding N S, Huang Y, Lu Z Q, Huang X G, Huang R H |
| Affiliation: | Institute of Swine Science, Nanjing Agricultural University, Nanjing 210095, China |
| Title: | Genome-wide association analysis reveals genomic regions on Chromosome 13 affecting litter size and candidate genes for uterine horn length in Erhualian pigs |
| Journal: | Animal : an international journal of animal bioscience, 2018, 12(12):2453-2461 |
| Links: |
PubMed | Abstract | List all data
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