Release 56
(Apr 24, 2025)

QTL 154541 Description:

 Trait Information
Trait name: Teat number Vertebrate Trait Ontology: Nipple quantity
Reported name: (n/a) Product Trait Ontology: n/a
Symbol: TNUM Clinical Measurement Ontology: Teat number
 QTL Map Information
Chromosome:8
QTL Peak Location:100.93 (cM)
QTL Span:100.58-101.27 (cM)
111.1-111.8 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs81476910
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:Mendelian
Test base:Experiment-wise
Threshold significance level:Significant
P_values7.12E-5
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

User inputs on QTL #154541
  • Add your annotations
  • Add your comments
  • Report problems
  •  QTL Experiment in Brief
    Animals:Animals were Yorkshire pigs.
     Breeds associated:
    Design:Animals were genotyped using the Illumina PorcineSNP60 BeadChip and analyzed for teat number. A total of 42,953 SNPs were used for analysis.
    Analysis:A mixed linear model was used.
    Software:GCTA
    Notes: 
    Links:Edit

     Reference
    Authors:Uzzaman MR, Park JE, Lee KT, Cho ES, Choi BH, Kim TH
    Affiliation:Animal Genomics & Bioinformatics Division, National Institute of Animal Science, RDA, Wanju 55365, Korea
    Title:Whole-genome association and genome partitioning revealed variants and explained heritability for total number of teats in a Yorkshire pig population
    Journal:Asian-Australasian journal of animal sciences, 2018, 31(4): 473-479
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #29059723
  • Add your comments
  • Note similar findings
  • Note contradictions
  • Cite this Data:

    Animal QTLdb: QTL154541 was published in 2018, and was curated into QTLdb on 2018-05-03. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:154541

     

    © 2003-2025: USA · USDA · NRPSP8 · Program to Accelerate Animal Genomics Applications. Contact: Bioinformatics Team