Release 56
(Apr 24, 2025)

QTL 166710 Description:

 Trait Information
Trait name: Subcutaneous fat thickness Vertebrate Trait Ontology: Subcutaneous adipose thickness
Trait details: backfat thickness Product Trait Ontology: n/a
Symbol: SCF Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:11
QTL Peak Location:0.00 (cM)
QTL Span:0.00-0.00 (cM)
33.0-33.0 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:-
Analysis type:Association
Model tested:Mendelian
Test base:Genome-wise
Threshold significance level:Significant
P_values<0.05
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were commercial Landrace and Yorkshire pigs.
     Breeds associated:
    Design:Animals were genotyped for 345,570 SNPs and analyzed for body weight and backfat thickness.
    Analysis:A mixed linear model with a pedigree relationship matrix was used to implement GWAS.
    Software:GCTA, R software, GEMMA
    Notes: 
    Links:Edit

     Reference
    Authors:Yang Q, Wu P, Wang K, Chen D, Zhou J, Ma J, Li M, Xiao W, Jiang A, Jiang Y, Bai L, Zhu L, Li X, Tang G
    Affiliation:College of Animal Science and Technology, Sichuan Agricultural University, Chengdu, Sichuan, China
    Title:SNPs associated with body weight and backfat thickness in two pig breeds identified by a genome-wide association study
    Journal:Genomics, 2018, S0888-7543(18)30329-X
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #30439481
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  • Cite this Data:

    Animal QTLdb: QTL166710 was published in 2018, and was curated into QTLdb on 2019-01-07. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:166710

     

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