Release 56
(Apr 24, 2025)

QTL 170630 Description:

 Trait Information
Trait name: Subcutaneous fat thickness Vertebrate Trait Ontology: Subcutaneous adipose thickness
Trait details: average backfat thickness Product Trait Ontology: n/a
Symbol: BFT Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:5
QTL Peak Location:n/a
QTL Span:n/a
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs81343150
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:Mendelian
Test base:-
Threshold significance level:Significant
Bayes_value304.09
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Yorkshire pigs.
     Breeds associated:
    Design:Animals were genotyped using the Illumina PorcineSNP60 BeadChip v2 and analyzed for growth and production traits. A total of 47,697 SNPs were used for analysis.
    Analysis:The BayesB method was used for GWAS.
    Software:FImpute, ASReml
    Notes: 
    Links:Edit

     Reference
    Authors:Lee J, Kang JH, Kim JM
    Affiliation:Department of Animal Science and Technology, Chung-Ang University, Anseong-si, Gyeonggi-do 17546, Korea
    Title:Bayes Factor-Based Regulatory Gene Network Analysis of Genome-Wide Association Study of Economic Traits in a Purebred Swine Population
    Journal:Genes, 2019, 10(4)
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #30974885
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  • Cite this Data:

    Animal QTLdb: QTL170630 was published in 2019, and was curated into QTLdb on 2019-04-29. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:170630

     

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