| QTL Map Information |
|---|
| Chromosome: | 16 |
| QTL Peak Location: | 0.00 (cM) |
| QTL Span: | 0.00-0.00 (cM)
71.0-71.8 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | rs332147015 |
| Peak: | |
| Lower, "Significant": | rs786670445 |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | QTL |
| Model tested: | Mendelian |
| Test base: | - |
| Threshold significance level: | Significant |
 |
VARIANCE | 2.55% | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Duroc pigs. |
| Breeds associated:
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| Design: | Animals were genotyped using the GeneSeek Genomic Profiler Porcine HD chip and analyzed for number of piglets born alive. A total of 57,962 SNPs were used for CNV analysis and GWAS. |
| Analysis: | A weighted single-step approach was used for GWAS. |
| Software: | PennCNV, GenomeStudio v2.0, AIREMLF90, BLUPF90 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Stafuzza NB, Silva RMO, Fragomeni BO, Masuda Y, Huang Y, Gray K, Lourenco DAL |
| Affiliation: | Department of Animal and Dairy Science, University of Georgia, Athens, GA, USA |
| Title: | A genome-wide single nucleotide polymorphism and copy number variation analysis for number of piglets born alive |
| Journal: | BMC genomics, 2019, 20(1): 321 |
| Links: |
PubMed | Abstract | List all data
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