| QTL Map Information |
|---|
| Chromosome: | 1 |
| QTL Peak Location: | 0.00 (cM) |
| QTL Span: | 0.00-0.00 (cM)
139.6-139.6 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs80930659 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | n/a |
| Threshold significance level: | Significant |
 |
VARIANCE | 1.29% | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | LRRK1 (leucine rich repeat kinase 1) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Landrace and Large White pigs. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina PorcineSNP60 BeadChip and analyzed for reproductive traits. A total of 47,590 (Landrace) or 47,865 (Large White) SNPs were used for analysis. |
| Analysis: | GWAS was performed using single-step genomic BLUP |
| Software: | BLUPF90 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Suwannasing R, Duangjinda M, Boonkum W, Taharnklaew R, Tuangsithtanon K |
| Affiliation: | Betagro Hybrid International Company Limited, Bangkok 10210, Thailand |
| Title: | The identification of novel regions for reproduction trait in Landrace and Large White pigs using a single step genome-wide association study |
| Journal: | Asian-Australasian journal of animal sciences, 2018, 31(12): 1852-1862 |
| Links: |
PubMed | Abstract | List all data
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