Release 56
(Apr 24, 2025)

QTL 171990 Description:

 Trait Information
Trait name: Body circumference Vertebrate Trait Ontology: n/a
Trait details: chest circumference Product Trait Ontology: n/a
Symbol: BODYCIR Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:3
QTL Peak Location:0.00 (cM)
QTL Span:0.00-0.00 (cM)
76.5-76.5 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs318725892
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:n/a
Test base:Comparison-wise
Threshold significance level:Significant
P_values6.23E-05
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

User inputs on QTL #171990
  • Add your annotations
  • Add your comments
  • Report problems
  •  QTL Experiment in Brief
    Animals:Animals were Sushan pigs.
     Breeds associated:
    Design:Animals were genotyped using 38,128 informative SNPs on the Affymetrix Porcine SNP 55K Array.
    Analysis:A generalized linear mixed model, in which the variance-covariance matrix is proportional to genome-wide identity-by-state.
    Software:GenABEL
    Notes: 
    Links:Edit

     Reference
    Authors:Lisheng Zhou, Weimin Zhao, Yanfeng Fu, Xiaomin Fang, Shouwen Ren, Jun Ren
    Affiliation:1. Institute of Animal Science, Key Laboratory of Animal Breed Improvement and reproduction, Jiangsu Academy of Agricultural Sciences, Nanjing, China. 2. College of Animal Science, South China Agricultural University, 510642, Guangzhou, China
    Title:Genome-wide detection of genetic loci and candidate genes for teat number and body conformation traits at birth in Chinese Sushan pigs
    Journal:animal genetics, 2019, Sept 2
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  

     Additional Information
    Comments:GBuild:SS_11.1
    User inputs on reference #31475745
  • Add your comments
  • Note similar findings
  • Note contradictions
  • Cite this Data:

    Animal QTLdb: QTL171990 was published in 2019, and was curated into QTLdb on 2019-06-18. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:171990

     

    © 2003-2025: USA · USDA · NRPSP8 · Program to Accelerate Animal Genomics Applications. Contact: Bioinformatics Team