| QTL Map Information |
|---|
| Chromosome: | 1 |
| QTL Peak Location: | 27.34 (cM) |
| QTL Span: | 27.34-27.34 (cM)
50.4-50.4 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs81211347 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | n/a |
| Threshold significance level: | Significant |
 |
P_values | <0.0001 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | COL9A1 (collagen, type IX, alpha 1) |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
|
| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Pigs were either sows from Newsham Choice Genetics or F2 animals from the ISU Berkshire x Yorkshire family. |
| Breeds associated:
n/a
|
| Design: | Animals were genotyped for two SNPs in COL9A1 and analyzed for lean meat production. |
| Analysis: | A mixed model was used. |
| Software: | SAS |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Fan B, Onteru SK, Nikkila MT, Stalder KJ, Rothschild MF |
| Affiliation: | Department of Animal Science and Center for Integrated Animal Genomics, Iowa State University, 2255 Kildee Hall, Ames, IA 50011, USA |
| Title: | The COL9A1 gene is associated with longissimus dorsi muscle area in the pig. |
| Journal: | Animal genetics, 2009, 40(5): 788 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | Population A |
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