Release 56
(Apr 24, 2025)

QTL 17862 Description:

 Trait Information
Trait name: Meat color Vertebrate Trait Ontology: n/a
Trait details: meat color value Product Trait Ontology: Meat color
Symbol: MCOL Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:8
QTL Peak Location:102.5 (cM)
QTL Span:122.30-122.44 (cM)
143.4-143.5 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:-
Analysis type:Association
Model tested:Mendelian
Test base:n/a
Threshold significance level:Significant
P_values<0.05
Dominance effect:-0.257
Additive effect:-0.165
Associated Gene:PITX2 (paired-like homeodomain 2)
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Large White x Meishan pigs.
     Breeds associated:
    Design:Animals were genotyped for four SNPs in PITX2 and analyzed for meat quality traits.
    Analysis:The general linear model procedure was used.
    Software:SAS
    Notes: 
    Links:Edit

     Reference
    Authors:Wu W, Zuo B, Ren Z, Hapsari AA, Lei M, Xu D, Li F, Xiong Y
    Affiliation:Key Laboratory of Swine Genetics and Breeding, Ministry of Agriculture, College of Animal Science, Huazhong Agricultural University, Wuhan, 430070, China
    Title:Identification of four SNPs and association analysis with meat quality traits in the porcine Pitx2c gene
    Journal:Sci China Life Sci, 2011, 54(5):426-33
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  

     Additional Information
    Comments:c.636C>T
    User inputs on reference #21574044
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  • Cite this Data:

    Animal QTLdb: QTL17862 was published in 2011, and was curated into QTLdb on 2012-08-23. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:17862

     

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