| QTL Map Information |
|---|
| Chromosome: | 2 |
| QTL Peak Location: | 0.2 (cM) |
| QTL Span: | 1.55-2.06 (cM)
3.5-4.2 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | n/a |
| Threshold significance level: | Significant |
 |
VARIANCE | 0.12 | | P_values | 0.004 | | Dominance effect: | 0.007 |
| Additive effect: | -0.015 |
| Associated Gene: | IRF7 (interferon regulatory factor 7) |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
|
| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Large White x Meishan pigs. |
| Breeds associated:
|
| Design: | Animals were genotyped for a SNP in IRF7 and analyzed for hematological traits. |
| Analysis: | A linear mixed model was fitted using restricted maximum likelihood. |
| Software: | ASREML |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Brock AJ, Matika O, Wilson AD, Anderson J, Morin AC, Finlayson HA, Reiner G, Willems H, Bishop SC, Archibald AL, Ait-Ali T |
| Affiliation: | The Roslin Institute and Royal School of Veterinary Studies, The University of Edinburgh, Roslin BioCentre, Midlothian, UK |
| Title: | An intronic polymorphism in the porcine IRF7 gene is associated with better health and immunity of the host during Sarcocystis infection, and affects interferon signalling |
| Journal: | Animal Genetics, 2011, 42(4):386-94 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | g.761A>G; difference days 14-0 |
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