| QTL Map Information |
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| Chromosome: | 6 |
| QTL Peak Location: | 131.32 (cM) |
| QTL Span: | 131.32-131.32 (cM)
133.2-133.2 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs81391647 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Experiment-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were from a cross between Korean native sires and Landrace dams. |
| Breeds associated:
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| Design: | Animals were genotyped using Illumina iSelect Infinium Porcine ArrayChips and analyzed for backfat thickness and intramuscular fat. For the analysis, 235 SNPs on chromosome 6 were used. |
| Analysis: | The genome-wide rapid association mixed model and regression approach was used. |
| Software: | ASREML, R/SNPassoc |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Kyung-Tai Lee, Mi-Jeong Byun, Kyung-Soo Kang, Eung-Woo Park, Seung-Hwan Lee, Seoae Cho, HyoYoung Kim, Kyu-Won Kim, TaeHeon Lee, Jong-Eun Park, WonCheoul Park, DongHyun Shin, Hong-Seog Park, Jin-Tae Jeon, Bong-Hwan Choi, Gul-Won Jang, Sang-Haeng Choi, Dae-Won Kim, Dajeong Lim, Hae-Suk Park, Mi-Rim Park, Jurg Ott, Lawrence B. Schook, Tae-Hun Kim mail, Heebal Kim |
| Affiliation: | Division of Animal Genomics and Bioinformatics, National Institute of Animal Science, Rural Development Administration, Suwon, Republic of Korea |
| Title: | Neuronal genes for subcutaneous fat thickness in human and pig are identified by local genomic sequencing and combined SNP association study. |
| Journal: | PloS one, 2011, 6(2): e16356 |
| Links: |
PubMed | Abstract | List all data
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