Release 56
(Apr 24, 2025)

QTL 180427 Description:

 Trait Information
Trait name: Number of muscle fibers per unit area Vertebrate Trait Ontology: Skeletal muscle fiber morphology trait
Reported name: (n/a) Product Trait Ontology: n/a
Symbol: NUMMF Clinical Measurement Ontology: Skeletal muscle fiber density
 QTL Map Information
Chromosome:6
QTL Peak Location:0.00 (cM)
QTL Span:0.00-0.00 (cM)
81.1-81.1 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs81324726
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:Mendelian
Test base:Genome-wise
Threshold significance level:Significant
VARIANCE6.87%
P_values<0.05
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Large White x Min F2 pigs. Beijing Black pigs were used in a validation study.
     Breeds associated:
    Design:Animals were genotyped using the Illumina PorcineSNP60 BeadChip and analyzed for muscle fiber number and diameter. A total of 45,423 SNPs were used for analysis.
    Analysis:Mixed linear models were used.
    Software:TASSEL 5.0, SAS
    Notes: 
    Links:Edit

     Reference
    Authors:Zhang L, Guo Y, Wang L, Liu X, Yan H, Gao H, Hou X, Zhang Y, Guo H, Yue J, An J, Wang L
    Affiliation:Key Laboratory of Animal (Poultry) Genetics Breeding and Reproduction, Ministry of Agriculture, Department of Animal Genetics and Breeding, Institute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing, China
    Title:Genomic variants associated with the number and diameter of muscle fibers in pigs as revealed by a genome-wide association study
    Journal:Animal : an international journal of animal bioscience, 2020, 14(3):475-481
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #31610816
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  • Cite this Data:

    Animal QTLdb: QTL180427 was published in 2020, and was curated into QTLdb on 2019-10-28. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:180427

     

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