| QTL Map Information |
|---|
| Chromosome: | 10 |
| QTL Peak Location: | 23.79 (cM) |
| QTL Span: | 14.23-33.34 (cM)
5.8-16.4 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | rs81428227 |
| Peak: | rs81224512 |
| Lower, "Significant": | rs81421137 |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | QTL |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 4.0E-5 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Danish Duroc, Yorkshire, and Danish Landrace boars. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Porcine SNP60 BeadChip and analyzed for traits related to boar taint. |
| Analysis: | A classical genome scan was done to identify QTL regions, and haplotype analysis was used to confirm QTL association. |
| Software: | QTDT, PLINK |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Gregersen VR, Conley LN, Sorensen KK, Guldbrandtsen B, Velander IH, Bendixen C |
| Affiliation: | Department of Molecular Biology and Genetics, Faculty of Science and Technology, Aarhus University, P,O, Box 50, DK-8830 Tjele, Denmark |
| Title: | Genome-wide association scan and phased haplotype construction for quantitative trait loci affecting boar taint in three pig breeds. |
| Journal: | BMC genomics, 2012, 13(1): 22 |
| Links: |
PubMed | Abstract | List all data
| Edit |
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