| QTL Map Information |
|---|
| Chromosome: | 6 |
| QTL Peak Location: | 44.38 (cM) |
| QTL Span: | 44.38-44.38 (cM)
41.7-41.7 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs332944984 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 1.92E-14 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were purebred Duroc, Landrace, and Yorkshire sows. |
| Breeds associated:
|
| Design: | Genotyping-by-sequencing was carried out to identify SNPs associated with bone mineral density. A total of 218,141 SNPs were used for GWAS. |
| Analysis: | The FarmCPU (fixed and random model circulating probability unification) model was used for GWAS. |
| Software: | R package MVP, PLINK, Beagle |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Jiang B, Wang M, Tang Z, Du X, Feng S, Ma G, Ye D, Cheng H, Wang H, Liu X |
| Affiliation: | Key Lab of Swine Healthy Breeding of Ministry of Agriculture and Rural Affairs, Guigang537100, China |
| Title: | Genome-wide association study of bone mineral density trait among three pig breeds |
| Journal: | Animal : an international journal of animal bioscience, 2020, 14(12):2443-2451 |
| Links: |
PubMed | Abstract | List all data
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