| QTL Map Information |
|---|
| Chromosome: | 18 |
| QTL Peak Location: | 48.87 (cM) |
| QTL Span: | 48.56-49.18 (cM)
36.7-37.2 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | rs699382234 |
| Peak: | |
| Lower, "Significant": | rs691713806 |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | QTL |
| Model tested: | n/a |
| Test base: | Experiment-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Large White pigs. |
| Breeds associated:
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| Design: | Animals were genotyped using the Illumina PorcineSNP60 v2 BeadChip and analyzed for haplotype association with hematological and clinical-biochemical traits. A total of 45,536 SNPs were used for analysis. |
| Analysis: | Linear mixed models were used for GWAS. |
| Software: | GHap in R, GEMMA, PLINK v1.09 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Bovo S, Ballan M, Schiavo G, Gallo M, Dall'Olio S, Fontanesi L |
| Affiliation: | Department of Agricultural and Food Sciences, Division of Animal Sciences, University of Bologna, Viale G. Fanin 46, Bologna, 40127, Italy |
| Title: | Haplotype-based genome-wide association studies reveal new loci for haematological and clinical-biochemical parameters in Large White pigs |
| Journal: | References, 2020, 51(4): 601-606 |
| Links: |
PubMed | Abstract | List all data
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